The spatial expression and regulation of transcription factors IDEF1 and IDEF2
Takanori Kobayashi, Yuko Ogo, May Sann Aung, Tomoko Nozoye, Reiko Nakanishi Itai, Hiromi Nakanishi, Takashi Yamakawa and Naoko K.Nishizawa. Ann Bot, 105(7), 1109-1117 (2010)

A Highly Sensitive, Quick, and Simple Quantification Method for Nicotianamine and 2-Deoxymugineic Acid from Minimum Samples Using LC/ESI-TOF-MS Achieves Functional Analysis of these Components in Plants. YusukeKAKEI, Isomaro YAMAGUCHI,  Takanori KOBAYASHI, Michiko TAKAHASHI,Hiromi NAKANISHI, Takashi YAMAKAWA, Naoko NISHIZAWA K. Plant and cell physiology 50,1988-1993, (2009)

Key role for transketolase activity in erythritol production by Trichosporonoides megachiliensis SN-G42. Katsuhiko Sawada, Arihiro Taki, Takashi Yamakawa and Minoru Seki. Journal of Bioscience and Bioengineering, 108,(5),385-390,(2009)

Production of Ascaris suum As14 protein and its fusion protein with cholera toxin B subunit in rice seeds. Tomoko Nozoye,  Fumio Takaiwa, Naotoshi Tsuji, Takashi Yamakawa, Takeshi Arakawa, Yoshihiro Hayashi, Yasunobu Matusmoto., Journal of Veterinary Medical Science, 71, (7), 995-1000, (2009)

Biotic and abiotic stresses induce AbSAMT1, encoding S-adenosyl-L-methionine salicylic acid carboxyl methyltransferase, in Atropa belladonna., Soonil Kwon, Kenichi Hamada, Aya Matsuyama, Michiko Yasuda, Hideo Nakashita, and Takashi Yamakawa, Plant Biotechnology 25, (2)207−205 (2009)

Oral immunogenicity and protective efficiency in mice of transgenic rice plants producing a vaccine candidate antigen(As16) of Ascaris suum fused with cholera toxin B subunit., Yasunobu Matusmoto, Seiko Suzuki, Tomoko Nozoye, Takashi Yamakawa, Yasuhiro Takashima, Takeshi Arakawa, Naotoshi Tsuji, Fumio Takaiwa, Yoshihiro Hayashi., Transgenic Research, 18, (2), 185-192, (2009)

Heat-inducible production of beta-glucuronidase in tobacco hairy root cultures46,
Kung-Ta Lee, Shih-Cheng Chen, Bor-Luen Chiang, Takashi Yamakawa., Appl. Microbiol. Biotechnol. 73, (5) 1047-53 (2007)

High-efficiency Agrobacterium rhizogenes-mediated transformation of heat inducible sHSP18.2-GUS in Nicotiana tabacum., Shih-Cheng Chen,  Hui-Wen Liu,  Kung-Ta Lee,  Takashi Yamakawa, Plant Cell Rep. 26, (1) 29-37 (2007)

High-efficiency Agrobacterium rhizogenes-mediated transformation of heat inducible sHSP18.2-GUS in Nicotiana tabacum. Shih-Cheng Chen, Hui-Wen Liu, Kung-Ta Lee, Takashi Yamakawa, Plant Cell Rep., 26, 29-37(2007)

Heat-inducible production of beta-glucuronidase in tabacco hairy root cultures. Kung-Ta Lee, Shih-cheng Chen, Bor-Luen Chiang, Takashi Yamakawa. Appl Microbiol Biotechnol., 73, 1047-1053(2007)

Expression of the protective Antigen (SpaA) in Transgenic Hairy Roots of Tobacco. Sukmin Ko, Jangryol Liu, Takashi Yamakawa, and Yasunobu Matsumoto, Plant Molecular biology Reporter., 24:251 (2006).

Random Amplified Polymorphic DNA Analysis to Distinguish  Brugmansia suaveolens, B. candida and B. versicolor., Asep Gana Suganda, Sukrasno , Yasutaka Nishiyama, Takashi Yamakawa, Nobuo Sugiyama., Plant Biotechnol. 23, (5) 519-520 (2006)

Effect of medium composition on the production of anthocyanins by hairy root cultures of Ipomoea batatas. Yasutaka Nishiyama and Takashi Yamakawa Plant Biotechnology, 21(5)411-414 (2004).

Responses of Transformed Roots of Atropa belladonna to the Treatment of Salicylic acid and other Phenolic Compounds., Hirano, Hiroshi., Koichiro Shimomura, and Takashi Yamakawa, Plant Biotechnology, 20,(1) 97-100 (2003).

Bioreacter production of camptothecin by hairy root cultures of Ophiorrhiza pumila., Hiroshi Sudo, Takashi Yamakawa, Mami Yamazaki, Norio Aimi and Kazuki Saito. Biotechnology Letters, 24, 359-363 (2002).

Salicylic Acid Carboxyl Methyltransferase Induced in Hairy Root Culture of Atropa belladonna after Treatment with Exogenously Added Salicylic Acid.,Hiroyuki Fukami, Tomoko Asakura, Hiroshi Hirano, Keiko Abe, Koichiro Shimomura, and Takashi Yamakawa., Plant and Cell Physiol, 43,(9) 1054-1058 (2002)

Light-Controlled Expression of beta-Glucuronidase Gene Driven by palg2b Promoter from Populus kitakamiensis in Nicotiana plumbaginifolia., Yasutaka Nishiyama and Takashi Yamakawa., Plant Biotechnology, 18(1), 67-70 (2001)

Response of Transformed Root Culture of atropa belladonna to Salicylic Acid Stress., Kung-Ta Lee, Hiroshi Hirano, Takashi Yamakawa, Tohru Kodama, Yasuo Igarashi and Koichiro Shimomura, J. Biosci. Bioeng., 91(6), 586-589 (2001).

Promotive Effect of Auxins on UDP-Glucose: Flavonol Glucosyltranferase Activity in Vitis sp. Cell Cultures, Tetsuo Kokubo, Yukiko Ambe-Ono, Mayumi Nakamura, Hidekatsu Ishida, Takashi Yamakawa, and Tohru Kodama, J. Biosci. Bioeng., 91(6), 564-569 (2001).

A Comparispn of GUS Activity in Liquid- and Air-Heat Shock Treatments Performed on Transgenic Nicotiana plumbaginifolia Harboring Arabidopsis HSP 18.2 Promoter-GUS Chimera Gene. Masamitsu Moriwaki, Takashi Yamakawa, Tutomu Washino, Tohru Kodama, and Yasuo Igarashi., Plant Biotechnology, 16(4), 303-305(1999).

Delayed Recovery of beta-Glucronidase Activity Driven by an Arabidopsis Heat Shock Promoter in Heat-stressed Transgenic Nicotiana plumbaginifolia., Masamitsu Moriwaki, Takashi Yamakawa, Tutomu Washino, Tohru Kodama, and Yasuo Igarashi., Plant Cell Reports, 19, 96-100(1999).

Organ-specific Expression of beta-Glucronidase Activity Driven by the Arabidopsis Heat-shock Promoter in Heat-stressed Transgenic Nicotiana plumbaginifolia., Masamitsu Moriwaki, Takashi Yamakawa, Tutomu Washino, Tohru Kodama, and Yasuo Igarashi., Plant Cell Reports, 18, (1999).

Characterization of chilli pepper hairy roots expressing the parsely PAL2 gene.,Susumu Sekiguchi, Takashi Yamakawa, Tohru Kodama, Steven M. Smith, Michael M. Yeoman, Plant Biotechnology, 16 (2), 153-158 (1999)

A Comparispn of GUS Activity in Liquid- and Air-Heat Shock Treatments Performed on Transgenic Nicotiana plumbaginifolia Harboring Arabidopsis HSP 18.2 Promoter-GUS Chimera Gene. Masamitsu Moriwaki, Takashi Yamakawa, Tutomu Washino, Tohru Kodama, and Yasuo Igarashi., Plant Biotechnology, 16(3) (1999).

Suppressed Phenylalanine Ammonia-lyase Activity after Heat Shock in Transgenic Nicotiana plumbaginifolia Containing an Arabidopsis HSP 18.2-Parsley PAL2 Chimera Gene., Masamitsu Moriwaki, Takashi Yamakawa, Tutomu Washino, Tohru Kodama, and Yasuo Igarashi., J. Ferment Bioeng., 87(5), 588-593 (1999).

Production of Tropane Alkaloids by Transformed Root Cultures of Atropa belladonna in Stirred Bioreactors with a Stainless Steel Net., Kung-Ta Lee, Takeshi Suzuki, Takashi Yamakawa, Tohru Kodama, Yasuo Igarashi and Koichiro Shimomura, Plant Cell Reports, 18 (7/8) 567-571 (1999).

Effect of Chemicals on Alkaloid Production by Belladonna Transformed Roots., Kung-Ta Lee, Takashi Yamakawa, Tohru Kodama, and Koichiro Shimomura, Phytochemistry, 49 (8) 2343-2347 (1998).

Effects of Aeration on Tropane Alkaloid Production by Transformed Root of Atropa belladonna in Flask Cultures., Kung-Ta Lee,Takashi Yamakawa,Tohru Kodama, Yasuo Igarashi, and Koichiro Shimomura,J. Ferment Bioeng. 86, (6) 614-616, (1998).

Transformation of chilli pepper (Capsicum frutescens) with a phenylalanine ammonia-lyase gene., Takashi Yamakawa, Susumu Sekiguchi, Tohru Kodama , Steven M. Smith, Michael M. Yeoman,Plant Biotechnology, 15, (4) 189-193, (1998).

Plant Regeneration from Wahlenbergia marginata Hairy Root Cultures, Michiko Ando, Koichiro Shimomura, Takashi Yamakawa and Kanji Ishimaru, Plant Biotechnology 15, (1) 39-40, (1998).

Polyacetylene Production in Transformed root cultures of Campanula lactiflora.Kanji Ishimaru, Michiko Ando, Takashi Yamakawa, Kaori Touno, and Koichiro Shimomura.Narual Medicines, 52, (5), 448-451, (1998).

Polyacetylene Production in Hairy Cultures of Wahenbergia marginata. Michiko Ando, Koichiro Shimomura, Takaashi Yamakawa, and Kanji Ishimaru,Jouranl of Plant Physiology, 151, 759-762 (1997).

Polyacetylenes in Hairy Root Cultures of Lobelia siphilitica. Kanji Ishimaru, Shigenori Tasaki, Norie Tanaka, Koichiro Shimomura, Takashi Yamakawa, and Kunitoshi Yoshihira. Japanese Journal of Food Chemistry 4, (2), 85-88 (1997).

Application of Shield Hot-wire Viscosity Sensor to Monitoring Cultivations of Xanthomonas campestris and Nicotiana tabacum BY-2. Osato Miyawaki, Mieko Yoshikawa, Hiroyuki Kuwaharada, Kozo Nakamura, Takashi Yamakawa, Tohru Kodama, Kensuke Ito and Ichiro Nakajima. J. Ferment. Bioengineer. 82, (1) 68-72 (1996).

Establishment of Hairy Root Culture of Chilli Pepper (Capsicum frutescens). Susumu Sekiguchi, Takashi Yamakawa, Tohru Kodama, Steven M. Smith, and Michael M. Yeoman.Plant Tissue Culture Ltters, 13, (2) 219-221 (1996).